Sequence Matrix
 

Sequence Matrix 1.7.8

Sequence Matrix : Analyze phylogenetic data matrices and combine them with multiple genes using this Java-based application that lets you export sequences to various formats



Sequence Matrix is a Java-based software application that facilitates a user-friendly environment for analyzing phylogenetic data matrices and assembling them with multiple genes. It features sample files and lets you export sequences to various formats.

No setup necessary, besides Java

Provided that you have Java on your computer, it's not necessary to install anything else. You can simply drop the program files anywhere on the disk or on a USB flash drive and directly run the executable Jar file on any computer with Java. More importantly, unlike most installers, it shouldn't make any changes to the Windows registry.

Clear-cut interface and advanced options

The GUI is based on a standard window with a well-structured layout, where you can use samples and import sequences from FAS-formatted files, analyze columns with taxons, total lengths and number of charsets, create outgroups, and delete any taxon. Sequences can be sorted by name, species epithet, number of character sets, or total length, depending on your preferences.It's possible to track down distances in all genes by specifying a range, view pairwise distances, export the table as a tab-delimited file, as well as to export sequences as TNT or NEXUS. Alternatively, sequences can be split into multiple files for each column, as well as saved for RAxML analysis on CIPRES.

Evaluation and conclusion

No error dialogs popped up in our tests, and the software utility didn't cause the operating system to hang or crash. It didn't put a strain on the overall performance of the machine, thanks to the fact that it needed low CPU and RAM to work properly.On the other hand, the interface is a bit rusty, and the options are not intuitive for less experienced users. Nevertheless, you can test Sequence Matrix for yourself, since it's free to use.

Conclusion

To conclude Sequence Matrix works on Windows operating system(s) and can be easily downloaded using the below download link according to GNU Public License license. Sequence Matrix download file is only 1.8 MB  in size.
Sequence Matrix was filed under the Science and Engineering category and was reviewed in softlookup.com and receive 5/5 Score.
Sequence Matrix has been tested by our team against viruses, spyware, adware, trojan, backdoors and was found to be 100% clean. We will recheck Sequence Matrix when updated to assure that it remains clean.

Sequence Matrix user Review

Please review Sequence Matrix application and submit your comments below. We will collect all comments in an effort to determine whether the Sequence Matrix software is reliable, perform as expected and deliver the promised features and functionalities.

Popularity 10/10 - Downloads - 436 - Score - 5/5

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Category: Science and Engineering 
Publisher: Gaurav ggvaidya
Last Updated: 9/11/2023
Requirements: Not specified
License: GNU Public License
Operating system: Windows
Hits: 2476
File size: 1.8 MB 
Price: Not specified


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